Dear Mohammed Sonbol, ...
Published by Thomas Getz, President at Earth Cycle BioTechnologyLLC
Dear Mohammed Sonbol, there are many causes of filamentous bacteria including nutrient deficiency, sludge age, organic loading rate, slug loading, sulfur loading and others. Contact Environmental Leverage Inc for technical support. http://www.environmentalleverage.com/index.html
You can send them a small (100 ml) sample for microscopic examination and they will send you a detailed technical report indicating the probable root-cause of your problem.
Best wishes,